vessel-segmentation

OpenMMLab Semantic Segmentation Toolbox and Benchmark.

[MICCAI'21] [Tensorflow] Retinal Vessel Segmentation using a Novel Multi-scale Generative Adversarial Network

pytorch implementation of paper https://www.frontiersin.org/articles/10.3389/fcomp.2020.00035/full

TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.

🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes

[MICCAI 2022 Best Paper Finalist] Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi Supervised Segmentation

Affinity Feature Strengthening for Accurate, Complete and Robust Vessel Segmentation(JBHI)

The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use the segmented carotid to extract Time-Activity-Curve from PET images. It mainly involves 3D image coregistration, vessel segmentation, partial valume correction.

An example of easytorch implementation on retinal vessel segmentation.

Sequential vessel segmentation via deep channel attention network

Applying Octave UNet for Retinal Vessel Segmentation.

Diabetic Retinopathy Feature Extraction and Binary Diagnosis

MATLAB GUIs for ToF-MRA data preprocessing, cerebrovascular segmentation and quantification

MultiResDenseUNet (SVOISP-2021-KH&KTMT-125) - Winner (3rd Prize) of The 10th Science and Technology Symposium for OISP Students. Ho Chi Minh City University Of Technology, Vietnam.

Robust PCA Unrolling Network for Super-resolution Vessel Extraction in X-ray Coronary Angiography

OIR Segmentation

U-net based CNN for segmenting blood vessel and thereafter removal of vessels from fundus image

A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution

a simple and easy to follow pytorch implementation of U-net for retina vessel segmentation

Software to analyse the topology of vascular networks.