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Foldseek enables fast and sensitive comparisons of large structure sets.
Align Tools is just perfect Unity asset plugin to align gui object
⛰ covtobed | Convert the coverage track from a BAM file into a BED file
Mini tool for arranging HTML elements along with ellipse subset shapes
🪱 PARASITE || A parallel sentence data preprocessing toolkit. Originally developed as a part of the `en-ru` winner submission of WMT20 Biomedical Translation Task.
Fiji / ImageJ plugin for Imaging Alignment. This plugin manages two types of alignment: Manual Alignment and Automatic Alignment.
snpick is a fast and memory-efficient Rust-based SNP extraction tool designed to handle large genomic alignments with minimal RAM usage and high-speed performance.
Pairwise alignment of membrane protein sequences
STRAC (Scalable Trace Comparison) http://arxiv.org/pdf/1910.03478
MICA-aligner is a new short-read aligner that is optimized in view of MIC's limitation and the extra parallelism inside each MIC core.
Software tools to collect Coronavirus sequences and create protein and nucleotide HMMs
Set of scripts to process HybSeq target enrichment HTS data (on computing grids).
Python code to compute adatper content in reads, kmer content, per-base-GC content (at a specific position in a read alignment, against reference genome), per base NC content (at a specific position in a read alignment against the reference genome), per base seq quality (across aligned reads), per base sequence content, per base quality scores, per tile sequence quality
Jupiter Bioinformatics (V2) uses the local sequence alignment algorithm and a few stored experiments for further experimentation on sequence alignment. It is an open source application designed in native JavaScript, that is able to align two sequences/texts in order to match the regions that are similar.
Showcase of parallelization technologies using sequence alignment algorithms
ProcessM: Real-Time Intelligent Process Mining Software