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sars-cov-2
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Data on COVID-19 (coronavirus) cases, deaths, hospitalizations, tests • All countries • Updated daily by Our World in Data
🦠 Huge collection of useful projects and resources for COVID-19 (2019 novel Coronavirus)
Models of COVID-19 outbreak trajectories and hospital demand
COVID-Net Open Source Initiative
Folding@home COVID-19 efforts
🫁 The world's first open-source ventilator tested on human patients. Mass-producible at a low cost (~2000€).
Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.
query stats of infected coronavirus cases
Julia and Python complex system applications in ecology, epidemiology, sociology, economics & finance; network science models including Bianconi-Barabási, Barabási-Albert, Watts-Strogatz, Waxman Model & Erdős-Rényi; graph theory algorithms involving Gillespie, Bron Kerbosch, Ramsey, Bellman Ford, A*, Kruskal, Borůvka, Prim, Dijkstra, DSatur, Randomized Distributed, Vizing, Topological Sort, DFS, BFS
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
Ultra-deep search for novel viruses
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
A global collection of Open Source projects during COVID-19
Unified COVID-19 Dataset
PyRoss: inference, forecasts, and optimised control of epidemiological models in Python. github.com/rajeshrinet/pyross
Die COVID-19-Impfung kann einen Wendepunkt in der Kontrolle der COVID-19-Pandemie darstellen und erfährt daher hohes Maß an öffentlicher Aufmerksamkeit. Einführung und Umsetzung der COVID-19-Impfung gehen mit besonderen Herausforderungen einher, die bei der Impfdatenerfassung zu berücksichtigen sind. In diesem Kontext ist es Ziel des Projekts 'D...
Assembly and intrahost/low-frequency variant calling for viral samples
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
