biology

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

The main repository for the development of the evolution game Thrive.

Repository for the main Dockerfile with the OpenWorm software stack and project-wide issues

A library of free open source icons for science illustrations in biology and chemistry

Therapeutics Commons (TDC): Multimodal Foundation for Therapeutic Science

Scripts to download genomes from the NCBI FTP servers

Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch

A PyTorch and TorchDrug based deep learning library for drug pair scoring. (KDD 2022)

Foundation Models for Genomics & Transcriptomics

Chainer Chemistry: A Library for Deep Learning in Biology and Chemistry

3d engine implementation in DNA code!

Java utilities for Bioinformatics

A small, highly performant JavaScript component for parsing and drawing SMILES strings. Released under the MIT license.

🔬A library of JavaScript components to represent biological data

Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software.

JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

Software for writing protocols and running them on the Opentrons Flex and Opentrons OT-2

Library for Digital Pathology Image Processing

Curated (meta)list of resources for Biology.

BioAmp EXG Pill is a small and elegant Analog Front End (AFE) board for BioPotential signal acquisition.