clinical-data

A Deep Learning Python Toolkit for Healthcare Applications.

Python suite to construct benchmark machine learning datasets from the MIMIC-III 💊 clinical database.

An open source openEHR server

Clinical Quality Language (CQL) is an HL7 specification for the expression of clinical knowledge that can be used within both the Clinical Decision Support (CDS) and Clinical Quality Measurement (CQM) domains. This repository contains complementary tooling in support of that specification.

Chronic Disease Prediction Using Medical Notes

Open platform to manage and share standardized clinical data, designed by @ppazos at CaboLabs Health Informatics.

Code for "Generalizable deep learning model for early Alzheimer’s disease detection from structural MRIs"

Machine reading comprehension on clinical case reports

PANDORA 💻

benchmark dataset and Deep learning method (Hierarchical Interaction Network, HINT) for clinical trial approval probability prediction, published in Cell Patterns 2022.

A toolkit for evaluating and monitoring AI models in clinical settings

Multimodal Machine Learning-based Knee Osteoarthritis Progression Prediction from Plain Radiographs and Clinical Data

🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datasets, cohorts, prediction tasks, endpoints, preprocessing, and models. Paper: https://arxiv.org/abs/2306.05109

Aggregate and analyse clinical trials data from public registers

A web application to find patients, build cohorts and visualize health records

Traditional Chinese Medicine Clinical Records Classification. In BIBM 2016

General tutorials for the setup and use of MedCAT.

PPSNet: Leveraging Near-Field Lighting for Monocular Depth Estimation from Endoscopy Videos (ECCV, 2024)

OADAT: Experimental and Synthetic Clinical Optoacoustic Data for Standardized Image Processing

[NeurIPS 2022] Code for "Retrieve, Reason, and Refine: Generating Accurate and Faithful Discharge/Patient Instructions"