mutation-analysis

PHP Mutation Testing library

State of the art mutation testing system for the JVM

Humbug is a Mutation Testing framework for PHP to measure the real effectiveness of your test suites and assist in their improvement. It eats Code Coverage for breakfast.

Practical mutation testing and fault injection for C and C++

Mutation testing resources: how to make better code by introducing bugs

SigProfilerExtractor allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.

Descartes supports developers to improve their test suites by reporting weak spots in covered code

SigProfilerMatrixGenerator creates mutational matrices for all types of somatic mutations. It allows downsizing the generated mutations only to parts for the genome (e.g., exome or a custom BED file). The tool seamlessly integrates with other SigProfiler tools.

SigProfilerPlotting provides a standard tool for displaying all types of mutational signatures as well as all types of mutational patterns in cancer genomes. The tool seamlessly integrates with other SigProfiler tools.

Maven plugin to handle multi module projects for PiTest

A Full Stack Variant Effect Predictor leveraging the Evo2 LLM for Single Nucleotide Variant(SNV) pathogenicity analysis, powered by a Modal‑deployed FastAPI GPU backend and a Next.js + Shadcn UI frontend

Mutation analysis tool for Coq verification projects

LLVM Mutation Artisan (MART) is a configurable mutation testing framework based on LLVM

Introduction to Mutation Testing

R wrapper for utilizing the SigProfilerMatrixGenerator framework

SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA replication, and DNA transcription on the activities of different mutational processes. SigProfilerTopography elucidates the unique topographical characteristics of mutational signatures.

Tool for mutation testing of C programs

An R wrapper for SigProfilerExtractor that allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.

Mutation testing tools for Rust

Tool for analyzing the inter-mutational distances between SNV-SNV and INDEL-INDEL mutations. Tool separates mutations into clustered and non-clustered groups on a sample-dependent basis.