c-elegans

Simulate the C. Elegans worm brain in your browser and interact with the worm as it moves around

WormPose: Image synthesis and convolutional networks for pose estimation in C. elegans

[Comms Bio 2023] Official Code for Fast Detection of Slender Bodies in High Density Microoscopy Data

Setting up C elegans as an RL environment.

Repository for WormSwin: Instance segmentation of C. elegans using vision transformer as appeared in Nature Scientific Reports 2023.

Implementation of CShaper https://doi.org/10.1038/s41467-020-19863-x

Fluorescent analysis of individualized C. elegans without using neural networks

SIM-CE is an advanced, user-friendly modeling and simulation environment in Simulink, for performing multi-scale behavioral analysis of the nervous system of Caenorhabditis elegans (C. elegans).

Liquid Neural Networks (LNN) - Continuous-time neural dynamics inspired by C. elegans. Parameter-efficient AI with 19-302 neurons for complex tasks. Hybrid Clojure/Python implementation.

Newtonian mechanics model for C. elegans locomotion

Development and training of advanced machine learning neural models designed to simulate worm cognition in response to the unique stressors of space, such as increased radiation and altered gravity and understand impact on worm behavior and cognition.

[Mathematics 2023] A Connectome-Based Digital Twin Caenorhabditis elegans Capable of Intelligent Sensorimotor Behavior

Bizzare conglomerate of C. Elegans and neuroscience thoughts.

Repository of the code created for the Bachelor's Thesis (Trabajo Fin de Grado) of Viktoriya Bohach for the degree on Biomedical Engineering in Universidad Rey Juan Carlos.

OpenAI Gym environments for simulating the nematode C. elegans

deep-learning for metadata extraction from the C. elegans embryo

WormRuler: A video analysis software to analyze body length of Caenorhabditis elegans

Flexible and disposable paper and plastic-based gel micropads for nematode handling, imaging and chemical testing