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soedinglab / MMseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

Bioinformatics sequence-clustering profile-search sequence-search linclust mmseqs metagenomics alignment blast taxonomy

1631

220

11 天前

soedinglab / hh-suite

Remote protein homology detection suite.

Bioinformatics alignment sequence-search profile-search Open Source C++protein-structure simd

568

140

5 个月前

rcedgar / muscle

Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.

Bioinformatics biology 算法 sequence-clustering sequence-search protein-structure

C++

241

5 天前

shenwei356 / LexicMap

LexicMap: efficient sequence alignment against millions of prokaryotic genomes

sequence-alignment sequence-search alignment

142

3 天前

soedinglab / MMseqs2-App

MMseqs2 app to run on your workstation or servers

sequence-search Electron Vue.js Go Docker Docker Compose profile-search Bioinformatics mmseqs alphafold2

Vue

3 天前

proteinevolution / Toolkit

The MPI Bioinformatics Toolkit

Bioinformatics protein-structure Web app reactive-programming computational-biology sequence-search profile-search Open Source akka play-framework

Scala

14 天前

Kingsford-Group / kourami

Kourami: Graph-guided assembly for HLA alleles

sequence-search

Java

6 年前

krzjoa / sciquence

Time series & sequence processing in Python 🗠

机器学习 Python time-series sequence-search scikit-learn

Python

3 年前

TravisWheelerLab / bagel

A framework for benchmarking sequence search tools

Bioinformatics sequence-search benchmarking

Python

3 年前

ggirelli / seq-lib-gg

Base librarys for sequencing data analysis.

sequence sequence-to-sequence sequence-alignment sequence-search Library base analysis sequencing

8 年前

itoshkov / multi-search

Multi-search Java library

Java sequence-search string-search

Java

22 天前