biopython

Official git repository for Biopython (originally converted from CVS)

Interactive network visualization in Python and Dash, powered by Cytoscape.js

python Circos

Unified biological sequence manipulation in Python

Work with bioinformatic files using Arrow, Polars, and/or DuckDB

Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.

Comparative Genomics Toolkit 3

Biopython Jupyter Notebook tutorial to characterize a small genome

Pandas DataFrames for phylogenetics

Simple phylogenetic tree visualization python package for phylogenetic analysis

Repositório do grupo de estudo de Bioinformática da rede de comunidades das PyLadies Brasil.

QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources

Predicting Future Influenza Virus Sequences with Machine Learning

PERF is an Exhaustive Repeat Finder

A Python implementation of the OrthoANI algorithm for nucleotide identity measurement.

This repo contains Bioinformatics lecture notes using Biopython.

Workflow for identifying and classifying homologous gene/protein sequences

Easy-to-use web application for visualization and comparison of genomes in Genbank file

Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.

Python code to extract features from Protein sequences for Machine Learning/Deep Learning